Evaluation of a mNGS Workflow for Infection Diagnosis Using Oxford Nanopore Sequencing.
NCT04864873 · Status: UNKNOWN · Phase: NA · Type: INTERVENTIONAL · Enrollment: 400
Last updated 2021-08-02
Summary
This is a laboratory evaluation of a new testing methodology for microbiological diagnosis, whereby participant samples received as part of routine care will be divided between the standard diagnostic pathway and this new pathway: metagenomic next generation sequencing (mNGS). Results obtained from the mNGS pathway will be compared against the standard diagnostic pathway in terms of sensitivity, specificity, accuracy and clinical impact. The samples will be identified at Wellington Southern Community Laboratories (WSCL), which provides laboratory services for Capital and Coast District Health Board, and forwarded to the Institute of Environmental Science and Research (ESR) to undergo mNGS testing.
Conditions
Interventions
- DIAGNOSTIC_TEST
-
Metagenomic next generation sequencing using Oxford Nanopore
See previous.
- DIAGNOSTIC_TEST
-
Standard microbiological diagnostic pathway
See previous.
Sponsors & Collaborators
-
Wellington Southern Community Laboratories
collaborator UNKNOWN -
Institute of Environmental Science and Research
collaborator UNKNOWN -
Capital and Coast District Health board
lead OTHER_GOV
Principal Investigators
-
Maxim G Bloomfield, MBChB · Wellington Southern Community Laboratories, Capital and Coast District Health Board
Study Design
- Allocation
- NON_RANDOMIZED
- Purpose
- DIAGNOSTIC
- Masking
- NONE
- Model
- SINGLE_GROUP
Eligibility
- Sex
- ALL
- Healthy Volunteers
- No
Timeline & Regulatory
- Start
- 2021-05-01
- Primary Completion
- 2022-05-31
- Completion
- 2022-05-31
Countries
- New Zealand
Study Locations
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